Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Characterization of sequence-specific errors in various next-generation sequencing systems.

Molecular bioSystems - 1 Mar 2016

Shin Sunguk, Park Joonhong

Abstract excerpt

Next-generation sequencing (NGS) is a popular method for assessing the molecular diversity of microbial communities without cultivation, for identifying polymorphisms in populations, and for comparing genomes and transcriptomes. However, sequence-specific errors (SSEs) by NGS systems can result in genome mis-assembly, overestimation of diversity in microbial community analyses, and false polymorphism discovery....

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Base Composition
Share to Base Sequence
Share to Genome, Bacterial

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to High-Throughput Nucleotide Sequencing

Share to Inverted Repeat Sequences

Share to Polymorphism, Single Nucleotide

Source

Identifiers

PMID: 26790373
DOI: 10.1039/c5mb00750j

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Characterization of sequence-specific errors in various next-generation sequencing systems.PMID 26790373Read ↗

Systematic evaluation of error rates and causes in short samples in next-generation sequencing.Semantic proximity Read ↗

Illumina error profiles: resolving fine-scale variation in metagenomic sequencing data.Semantic proximity Read ↗

Chasing Sequencing Perfection: Marching Toward Higher Accuracy and Lower Costs.Semantic proximity Read ↗

Implications of error-prone long-read whole-genome shotgun sequencing on characterizing reference microbiomesSemantic proximity Read ↗

NGS-eval: NGS Error analysis and novel sequence VAriant detection tooL.Semantic proximity Read ↗

Pitfalls of genotyping microbial communities with rapidly growing genome collections.Semantic proximity Read ↗

GemSIM: general, error-model based simulator of next-generation sequencing data.Semantic proximity Read ↗

Quantifying Replication Slippage Error in Cryptosporidium Metabarcoding Studies.Semantic proximity Read ↗

Next-generation sequencing techniques for eukaryotic microorganisms: sequencing-based solutions to biological problems.Semantic proximity Read ↗

Applying next-generation sequencing to unravel the mutational landscape in viral quasispecies.Semantic proximity Read ↗

Identification and correction of systematic error in high-throughput sequence data.Semantic proximity Read ↗

Benchmarking of computational error-correction methods for next-generation sequencing dataSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.