Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Peptide binding predictions for HLA DR, DP and DQ molecules.

BMC bioinformatics - 22 Nov 2010

Wang Peng, Sidney John, Kim Yohan, Sette Alessandro, Lund Ole, Nielsen Morten, Peters Bjoern

Abstract excerpt

BACKGROUND: MHC class II binding predictions are widely used to identify epitope candidates in infectious agents, allergens, cancer and autoantigens. The vast majority of prediction algorithms for human MHC class II to date have targeted HLA molecules encoded in the DR locus. This reflects a sign...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Alleles
Share to Binding Sites
Share to Epitopes

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genes, MHC Class II

Share to HLA-DP Antigens

Share to HLA-DQ Antigens

Share to HLA-DR Antigens

Share to Peptides

Source

Open in PubMed Open full text

Identifiers

PMID: 21092157
DOI: 10.1186/1471-2105-11-568
PMCID: PMC2998531

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 2 Sept 2026. Prepared record publication-21092157-2026-09-02.2. Manifest publication-graph-cohort-2026-09-02.2.

Source receipt: PubMed via Helena Literature Corpus, retrieved 2 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Peptide binding predictions for HLA DR, DP and DQ molecules.PMID 21092157Read ↗

Quantitative predictions of peptide binding to any HLA-DR molecule of known sequence: NetMHCIIpan.Semantic proximity Read ↗

Integration of HLA-DR linkage disequilibrium to MHC class II predictionsSemantic proximity Read ↗

MultiRTA: a simple yet reliable method for predicting peptide binding affinities for multiple class II MHC allotypes.Semantic proximity Read ↗

Characterizing the binding motifs of 11 common human HLA-DP and HLA-DQ molecules using NNAlign.Semantic proximity Read ↗

Discordant results among major histocompatibility complex binding affinity prediction toolsSemantic proximity Read ↗

PSSMHCpan: a novel PSSM-based software for predicting class I peptide-HLA binding affinity.Semantic proximity Read ↗

Machine learning predictions of MHC-II specificities reveal alternative binding mode of class II epitopes.Semantic proximity Read ↗

HLA-DR4Pred2: an improved method for predicting HLA-DRB1*04:01 bindersSemantic proximity Read ↗

Systematically benchmarking peptide-MHC binding predictors: From synthetic to naturally processed epitopesSemantic proximity Read ↗

Class II HLA-peptide binding prediction using structural principles.Semantic proximity Read ↗

Five HLA-DP molecules frequently expressed in the worldwide human population share a common HLA supertypic binding specificity.Semantic proximity Read ↗

Peptide binding prediction for the human class II MHC allele HLA-DP2: a molecular docking approach.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.