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Article

Evaluation of eight different bioinformatics tools to predict viral tropism in different human immunodeficiency virus type 1 subtypes.

Journal of clinical microbiology - 1 Mar 2008

Garrido Carolina, Roulet Vanessa, Chueca Natalia, Poveda Eva, Aguilera Antonio, Skrabal Katharina, Zahonero Natalia, Carlos Silvia, García Federico, Faudon Jean Louis, Soriano Vincent, de Mendoza Carmen

Abstract excerpt

Human immunodeficiency virus type 1 (HIV-1) tropism can be assessed using phenotypic assays, but this is quite laborious, expensive, and time-consuming and can be made only in sophisticated laboratories. More accessible albeit reliable tools for testing of HIV-1 tropism are needed in view of the prompt introduction of CCR5 antagonists in clinical practice. Bioinformatics tools based on V3 sequences might help to...

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Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

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Source

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Identifiers

PMID: 18199789
DOI: 10.1128/JCM.01611-07
PMCID: PMC2268339

Genes

CCR5

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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