Article
Modeling mutations in protein structures.
Protein science : a publication of the Protein Society - 1 Sept 2007
Feyfant Eric, Sali Andrej, Fiser András
Abstract excerpt
We describe an automated method for the modeling of point mutations in protein structures. The protein is represented by all non-hydrogen atoms. The scoring function consists of several types of physical potential energy terms and homology-derived restraints. The optimization method implements a combination of conjugate gradient minimization and molecular dynamics with simulated annealing. The testing set...
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