Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Multivariate analysis and visualization of splicing correlations in single-gene transcriptomes.

BMC bioinformatics - 18 Jan 2007

Emerick Mark C, Parmigiani Giovanni, Agnew William S

Abstract excerpt

BACKGROUND: RNA metabolism, through 'combinatorial splicing', can generate enormous structural diversity in the proteome. Alternative domains may interact, however, with unpredictable phenotypic consequences, necessitating integrated RNA-level regulation of molecular composition. Splicing correlations within transcripts of single genes provide valuable clues to functional relationships among molecular domains as...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Alternative Splicing
Share to Gene Library
Share to Models, Genetic

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Multivariate Analysis

Share to RNA Splice Sites

Share to RNA Splicing

Share to Spliceosomes

Share to Transcription, Genetic

Source

Open in PubMed Open full text

Identifiers

PMID: 17233916
DOI: 10.1186/1471-2105-8-16
PMCID: PMC1785386

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Multivariate analysis and visualization of splicing correlations in single-gene transcriptomes.PMID 17233916Read ↗

<i>SplAdder</i> : Identification, quantification and testing of alternative splicing events from RNA-Seq dataSemantic proximity Read ↗

SplicingFactory – Splicing diversity analysis for transcriptome dataSemantic proximity Read ↗

Identification of genetic variants associated with alternative splicing using sQTLseekeR.Semantic proximity Read ↗

Geometric inference of cross-species transcriptome correspondence using Gromov-Wasserstein optimal transportSemantic proximity Read ↗

Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells.Semantic proximity Read ↗

BRACE: A novel Bayesian-based imputation approach for dimension reduction analysis of alternative splicing at single-cell resolutionSemantic proximity Read ↗

Profiling of Nascent Lariat Intermediates Reveals Key Genetic Determinants of the Timing of Human Co-transcriptional SplicingSemantic proximity Read ↗

GenomicSuperSignature: interpretation of RNA-seq experiments through robust, efficient comparison to public databasesSemantic proximity Read ↗

Statistical tests for bivariate spatial association across multi-omics data with disjoint coordinatesSemantic proximity Read ↗

From transcriptional complexity to cellular phenotypes: Lessons from yeast.Semantic proximity Read ↗

Slinker: Visualising novel splicing events in RNA-Seq dataSemantic proximity Read ↗

Differential transcript usage from RNA-seq data: isoform pre-filtering improves performance of count-based methodsSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.