Back to search

Article

Slinker: Visualising novel splicing events in RNA-Seq data

2021-12-07

Abstract excerpt

Visualisation of the transcriptome relative to a reference genome is fraught with sparsity. This is due to RNA sequencing (RNA-Seq) reads being predominantly mapped to exons that account for just under 3% of the human genome. Recently, we have used exon-only references, superTranscripts, to improve visualisation of aligned RNA-Seq data through the omission of supposedly unexpressed regions such as introns. However...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
09b0b7ca-19a0-5f84-befd-7dbf476784ba
DOI
10.12688/f1000research.74836.1
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
Slinker: Visualising novel splicing events in RNA-Seq dataDOI 10.12688/f1000research.74836.1
Select a neighboring publication to make it the new centre.