Article
A comparative molecular similarity index analysis (CoMSIA) study identifies an HLA-A2 binding supermotif.
Journal of computer-aided molecular design - 1 Jan 2000
Doytchinova Irini A, Flower Darren R
Abstract excerpt
The 3D-QSAR CoMSIA technique was applied to a set of 458 peptides binding to the five most widespread HLA-A2-like alleles: A*0201, A*0202, A*0203, A*0206 and A*6802. Models comprising the main physicochemical properties (steric bulk, electron density, hydrophobicity and hydrogen-bond formation abilities) were obtained with acceptable predictivity (q2 ranged from 0.385 to 0.683). The use of coefficient contour...
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