Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Ordered catenation of sequence-tagged sites and multiplexed SNP genotyping by sequencing.

Nucleic acids research - 1 Feb 2002

Higasa Koichiro, Hayashi Kenshi

Abstract excerpt

We describe a method for the efficient genotyping of SNPs, involving sequencing of ordered and catenated sequence-tagged sites (OCS). In OCS, short genomic segments, each containing an SNP, are amplified by PCR using primers that carry specially designed extra nucleotides at their 5'-ends. Amplification products are then combined and converted to a concatamer in a defined order by a second round of thermal...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to DNA Primers
Share to Gene Order
Share to Japan

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Nucleic Acid Conformation

Share to Sensitivity and Specificity

Share to Sequence Alignment

Share to Sequence Tagged Sites

Share to Software

Source

Open in PubMed Open full text

Identifiers

PMID: 11809899
DOI: 10.1093/nar/30.3.e11
PMCID: PMC100310

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Ordered catenation of sequence-tagged sites and multiplexed SNP genotyping by sequencing.PMID 11809899Read ↗

Multiplex automated primer extension analysis: simultaneous genotyping of several polymorphisms.Semantic proximity Read ↗

Genotyping and haplotyping of polymorphisms directly from genomic DNA via coupled amplification and sequencing (CAS).Semantic proximity Read ↗

Arrayed primer extension reaction for genotyping on oligonucleotide microarray.Semantic proximity Read ↗

SESAME (SEquence Sorter & AMplicon Explorer): genotyping based on high-throughput multiplex amplicon sequencing.Semantic proximity Read ↗

Tri-nucleotide threading for parallel amplification of minute amounts of genomic DNA.Semantic proximity Read ↗

Primer-design for multiplexed genotyping.Semantic proximity Read ↗

Primer design for multiplexed genotyping.Semantic proximity Read ↗

The tagged microarray marker (TAM) method for high-throughput detection of single nucleotide and indel polymorphisms.Semantic proximity Read ↗

tGBS® genotyping-by-sequencing enables reliable genotyping of heterozygous loci.Semantic proximity Read ↗

Exo-proofreading, a versatile SNP scoring technology.Semantic proximity Read ↗

A system for specific, high-throughput genotyping by allele-specific primer extension on microarrays.Semantic proximity Read ↗

Genotyping by apyrase-mediated allele-specific extension.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.