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Benchmarking UMI-aware and standard variant callers on synthetic and real ctDNA datasets

2023-11-20

Abstract excerpt

<title>Abstract</title> <p>Background Circulating tumour DNA (ctDNA) is a subset of cell free DNA (cfDNA) released by tumour cells into the bloodstream. Circulating tumour DNA has shown great potential as a biomarker to inform treatment in cancer patients. Collecting ctDNA is minimally invasive and reflects the entire genetic makeup of a patient’s cancer. ctDNA variants in NGS data can be difficult to distinguis...

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Literature Corpus work
fee09ef7-c1b8-5211-985a-37ccc9005b75
DOI
10.21203/rs.3.rs-3610989/v1
Open publication

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Benchmarking UMI-aware and standard variant callers on synthetic and real ctDNA datasetsDOI 10.21203/rs.3.rs-3610989/v1
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