Article
In-silico cell sorting revealed granulocyte-specific single-cell-type gene expression from peripheral blood bulk expression data and its application as host response biomarkers to discriminate bacterial and viral infections
2026-04-13
Abstract excerpt
Peripheral Blood transcriptome analysis evaluated the bulk transcript abundance (TA) covering all leukocyte cell populations. However, there are 2 main problems in using bulk expression as biomarkers: (1) A long list of differential expression genes (DEGs) was found, and (2) DEGs cannot be attributed to a host response of any specific cell-type. TA assays after conventional cell sorting, as the gold-standard metho...
Topics
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- Antimicrobial Resistance in Staphylococcus
- Bacterial Identification and Susceptibility Testing
- COVID-19 Clinical Research Studies
- Genomics and Phylogenetic Studies
- interferon and immune responses
- SARS-CoV-2 and COVID-19 Research
- Tuberculosis Research and Epidemiology
- Viral gastroenteritis research and epidemiology
Identifiers and source
- Literature Corpus work
- e3e2d7b1-cee3-5376-95a2-c20b072d7d29
- DOI
- 10.64898/2026.04.09.717385
