Article

Snaptron: querying and visualizing splicing across tens of thousands of RNA-seq samples

2017-01-09

Abstract excerpt

As more and larger genomics studies appear, there is a growing need for comprehensive and queryable cross-study summaries. Snaptron is a search engine for summarized RNA sequencing data with a query planner that leverages R-tree, B-tree and inverted indexing strategies to rapidly execute queries over 146 million exon-exon splice junctions from over 70,000 human RNA-seq samples. Queries can be tailored by constrain...

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Literature Corpus work: da7861ca-0fe0-506e-ac1a-fabc2b66abc6
DOI: 10.1101/097881

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