Article

CHIPS: A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data

2021-03-10

Abstract excerpt

<h4>Motivation</h4> The chromatin profile measured by ATAC-seq, ChIP-seq, or DNase-seq experiments can identify genomic regions critical in regulating gene expression and provide insights on biological processes such as diseases and development. However, quality control and processing chromatin profiling data involve many steps, and different bioinformatics tools are used at each step. It can be challenging to ma...

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Literature Corpus work: d3da3f89-b500-5465-b986-bfc243f9b15e
DOI: 10.1101/2021.03.09.434676

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