Article

Beyond consensus sequence: a quantitative scheme for inferring transmission using deep sequencing in a bacterial transmission model

2022-11-18

Abstract excerpt

<title>Abstract</title> <p>Genomic surveillance provides a data source complementary to contact tracing to resolve putative transmission chains. However, the role of within-host diversity in transmission is understudied due to a lack of experimental and clinical datasets that capture within-host diversity in both donors and recipients. Here, we assess the utility of deep-sequenced genomic surveillance within a mo...

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Literature Corpus work: ca5870ea-2977-5d46-a82c-2062bf2d92ea
DOI: 10.21203/rs.3.rs-2228167/v1

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