Article

Genome-wide Pervasiveness and Localized Variation of <i>k</i> -mer-based Genomic Signatures in Eukaryotes

2025-06-17

Abstract excerpt

Genomic signatures are taxon-specific patterns in nucleotide sequence composition observed across different regions of a genome, used in the taxonomic classification of organisms and in inferring their evolutionary relationships. However, the nature and extent of the pervasiveness of a genomic signature across the expanse of a Telomere-to-Telomere (T2T) assembly, especially across the functionally diverse sequence...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: a5c118c3-80e4-50c7-a23a-9b77145b86f1
DOI: 10.1101/2025.06.12.659337

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Genome-wide Pervasiveness and Localized Variation of <i>k</i> -mer-based Genomic Signatures in EukaryotesDOI 10.1101/2025.06.12.659337Read

Genome-wide pervasiveness and localized variation of [Formula: see text]-mer-based genomic signatures in eukaryotes.Semantic proximity Read

Diversity and Genomic Organization of Non-B DNA Motifs in Haplotype-Resolved Human Genome AssembliesSemantic proximity Read

Organizational heterogeneity of vertebrate genomes.Semantic proximity Read

Hierarchical genomic feature annotation with variable-length queriesSemantic proximity Read

Non-canonical DNA in human and other ape telomere-to-telomere genomesSemantic proximity Read

FuzzyClusTeR: a web server for analysis of tandem and diffuse DNA repeat clusters with application to telomeric-like repeatsSemantic proximity Read

The Genomic Kaleidoscope: On the Hidden Dimensions of Within-Species Genomic Diversity.Semantic proximity Read

VAMPIRE: Analyzing variation and motif pattern in tandem repeatsSemantic proximity Read

The repertoire of short tandem repeats across the tree of lifeSemantic proximity Read

Read-Consistent Minimum Unique Substrings: A Parameter-Free, Linear-Time Framework for Genomic Sequence RepresentationSemantic proximity Read

DNA clustering and genome complexity.Semantic proximity Read

Evolutionary Tinkering Enriches the Hierarchical and Nested Structures in Amino Acid SequencesSemantic proximity Read