Back to search

Article

Transcription initiation mapping in 31 bovine tissues reveals complex promoter activity, pervasive transcription, and tissue-specific promoter usage

2020-09-06

Abstract excerpt

<h4>ABSTRACT</h4> Characterizing transcription start sites is essential for understanding the regulatory mechanisms that control gene expression. Recently, a new bovine genome assembly (ARS-UCD1.2) with high continuity, accuracy, and completeness was released; however, the functional annotation of the bovine genome lacks precise transcription start sites and contains a low number of transcripts in comparison to h...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
a4f05546-4c61-5865-8710-67243787f837
DOI
10.1101/2020.09.05.284547
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
Transcription initiation mapping in 31 bovine tissues reveals complex promoter activity, pervasive transcription, and tissue-specific promoter usageDOI 10.1101/2020.09.05.284547
An integrated multi-tissue atlas of epigenomic landscapes and regulatory elements in the bovine genomeSemantic proximity
A comprehensive manually-curated Compendium of Bovine Transcription FactorsSemantic proximity
The enhanced multi-tissue atlas of regulatory effects in cattleSemantic proximity
A multi-tissue atlas of regulatory variants in cattle.Semantic proximity
A high-resolution atlas of cattle regulatory variants and their cross-species activity in matched human cellsSemantic proximity
The nascent transcriptome delineates the regulatory landscape in human health and diseaseSemantic proximity
Sequence basis of transcription initiation in human genomeSemantic proximity
The enhanced multi-tissue atlas of regulatory effects in cattleSemantic proximity
Genetic variability of the activity of bidirectional promoters: a pilot study in bovine muscle.Semantic proximity
A catalog of transcription start sites across 115 human tissue and cell typesSemantic proximity
Characterising a large bovine lactating mammary ATAC-seq datasetSemantic proximity
The DoGA Consortium Atlas of Canine Enhancers and Promoters Across Tissues and DevelopmentSemantic proximity
Select a neighboring publication to make it the new centre.