Back to search

Article

ShinyArchR.UiO: User-friendly, integrative and open-source tool for visualisation of single-cell ATAC-seq data using ArchR

2021-06-22

Abstract excerpt

<h4>Motivation</h4> Mapping of chromatin accessibility landscapes in single-cells and the integration with gene expression enables a better understanding of gene regulatory mechanisms defining cell identities and cell-fate determination in development and disease. Generally, raw data generated from single-cell Assay for Transposase-Accessible Chromatin sequencing (scATAC-seq) are deposited in repositories that ar...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
9ed78c09-e2e5-5023-bc51-bf4a8a2c645d
DOI
10.1101/2021.06.21.449316
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
ShinyArchR.UiO: User-friendly, integrative and open-source tool for visualisation of single-cell ATAC-seq data using ArchRDOI 10.1101/2021.06.21.449316
Select a neighboring publication to make it the new centre.