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16SpeB: Towards defining bacterial species boundaries by intra-species gene sequence identity

2016-06-24

Abstract excerpt

<h4>ABSTRACT</h4> <h4>Summary</h4> 16SpeB ( 16 S rRNA-based Spe cies B oundary) is a package of Perl programs that evaluates total sequence variation of a bacterial species at the levels of the whole 16S rRNA sequences or single hypervariable (V) regions, using publicly-available sequences. The 16SpeB pipelines filter sequences from duplicated strains and of low quality, extracts a V region of interest using...

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Literature Corpus work: 9e10a8ee-34b0-5ed0-8d1b-e97abd8dd304
DOI: 10.1101/060657

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