Article

Exploring bacterial diversity via a curated and searchable snapshot of archived DNA sequences

2021-03-03

Abstract excerpt

<h4>ABSTRACT</h4> The open sharing of genomic data provides an incredibly rich resource for the study of bacterial evolution and function, and even anthropogenic activities such as the widespread use of antimicrobials. Whilst these archives are rich in data, considerable processing is required before biological questions can be addressed. Here, we assembled and characterised 661,405 bacterial genomes using a unif...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 66eabf72-7b7b-57c0-87c6-b4e1de98d2ee
DOI: 10.1101/2021.03.02.433662

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Exploring bacterial diversity via a curated and searchable snapshot of archived DNA sequencesDOI 10.1101/2021.03.02.433662Read

Acinetobase: the comprehensive database and repository of <i>Acinetobacter</i> strainsSemantic proximity Read

Genomic diversity of hospital-acquired infections revealed through prospective whole genome sequencing-based surveillanceSemantic proximity Read

Genomic Analysis of Diverse Environmental <i>Acinetobacter</i> Isolates Identifies Plasmids, Antibiotic Resistance Genes, and Capsular Polysaccharides Shared with Clinical StrainsSemantic proximity Read

Genomic surveillance framework and global population structure for <i>Klebsiella pneumoniae</i>Semantic proximity Read

Real-time search of all bacterial and viral genomic dataSemantic proximity Read

Decomposition of the pangenome matrix reveals a structure in gene distribution in the Escherichia coli species.Semantic proximity Read

Insights from 20 years of bacterial genome sequencing.Semantic proximity Read

Different evolutionary trends form the twilight zone of the bacterial pan-genomeSemantic proximity Read

A comprehensive and high-quality collection of <i>E. coli</i> genomes and their genesSemantic proximity Read

Towards a balanced view of the bacterial tree of life.Semantic proximity Read

A dual barcoding approach to bacterial strain nomenclature: Genomic taxonomy of <i>Klebsiella pneumoniae</i> strainsSemantic proximity Read

Recent advances in genomic DNA sequencing of microbial species from single cells.Semantic proximity Read