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Monkeybread: A Python toolkit for the analysis of cellular niches in single-cell resolution spatial transcriptomics data

2023-09-15

Abstract excerpt

<h4>Summary</h4> Spatial transcriptomics technologies enable the spatially resolved measurement of gene expression within a tissue specimen. With these technologies, researchers can investigate how cells organize into cellular niches which are defined as distinct regions in the tissue comprising a specific composition of cell types or phenotypes. While general-purpose software tools for the exploratory analysis o...

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Literature Corpus work
90f9290b-ae2a-522c-b95c-941c3499c85c
DOI
10.1101/2023.09.14.557736
Open publication

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Monkeybread: A Python toolkit for the analysis of cellular niches in single-cell resolution spatial transcriptomics dataDOI 10.1101/2023.09.14.557736
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