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Characterising indel diversity in a large <i>Mycobacterium tuberculosis</i> outbreak – implications for transmission reconstruction

2022-10-27

Abstract excerpt

Genomic sequencing of Mycobacterium tuberculosis (Mtb) , the primary aetiological agent of tuberculosis (TB) in humans, has been used to understand transmission dynamics and reconstruct past outbreaks. Putative transmission events between hosts can be predicted by linking cases with low genomic variation between pathogen strains, though typically only variation in single nucleotide polymorphisms (SNPs) is used to...

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Literature Corpus work
88e8d3f2-c45a-5a9a-9466-3146282096d2
DOI
10.1101/2022.10.26.513840
Open publication

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Characterising indel diversity in a large <i>Mycobacterium tuberculosis</i> outbreak – implications for transmission reconstructionDOI 10.1101/2022.10.26.513840
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