Article

Construction of whole genomes from scaffolds using single cell strand-seq data

2018-02-26

Abstract excerpt

Accurate reference genome sequences provide the foundation for modern molecular biology and genomics as the interpretation of sequence data to study evolution, gene expression and epigenetics depends heavily on the quality of the genome assembly used for its alignment. Correctly organising sequenced fragments such as contigs and scaffolds in relation to each other is a critical and often challenging step in the co...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: 7dd596f0-370a-5e99-b4a9-7f89b12f2ad8
DOI: 10.1101/271510

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Construction of whole genomes from scaffolds using single cell strand-seq dataDOI 10.1101/271510Read

Construction of Whole Genomes from Scaffolds Using Single Cell Strand-Seq Data.Semantic proximity Read

Single-cell template strand sequencing by Strand-seq enables the characterization of individual homologs.Semantic proximity Read

Multiplex generation and single-cell analysis of structural variants in mammalian genomes.Semantic proximity Read

Direct chromosome-length haplotyping by single-cell sequencing.Semantic proximity Read

Sequencing smart: <i>De novo</i> sequencing and assembly approaches for non-model mammalsSemantic proximity Read

Strand-seq and the future of personalized genomics.Semantic proximity Read

Cost-effective, high-throughput, single-haplotype iterative mapping and sequencing for complex genomic structuresSemantic proximity Read

A probabilistic framework for cellular lineage reconstruction using single-cell 5-hydroxymethylcytosine sequencingSemantic proximity Read

Chromosome-Length Haplotypes with StrandPhaseR and Strand-seq.Semantic proximity Read

SpLitteR: Diploid genome assembly using TELL-Seq linked-reads and assembly graphsSemantic proximity Read

High-speed whole-genome sequencing of a Whippet: Rapid chromosome-level assembly and annotation of an extremely fast dog's genomeSemantic proximity Read

A Primer for Single-Cell Sequencing in Non-Model Organisms.Semantic proximity Read