Article

Toward reproducible, scalable, and robust data analysis across multiplex tissue imaging platforms

2020-12-11

Abstract excerpt

The emergence of megascale single-cell multiplex tissue imaging (MTI) datasets necessitates reproducible, scalable, and robust tools for cell phenotyping and spatial analysis. We developed open-source, graphics processing unit (GPU)-accelerated tools for intensity normalization, phenotyping, and microenvironment characterization. We deploy the toolkit on a human breast cancer (BC) tissue microarray stained by cycl...

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Literature Corpus work: 6ea0ef19-b232-5c75-af42-1ecc1c8399c9
DOI: 10.1101/2020.12.11.422048

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