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Positional SHAP (PoSHAP) for Interpretation of Machine Learning Models Trained from Biological Sequences

2021-03-05

Abstract excerpt

Machine learning with multi-layered artificial neural networks, also known as “deep learning,” is effective for making biological predictions. However, model interpretation is challenging, especially for sequential input data used with recurrent neural network architectures. Here, we introduce a framework called “Positional SHAP” (PoSHAP) to interpret models trained from biological sequences by utilizing SHapely A...

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Literature Corpus work
4f644bcd-90bc-5886-b14f-5700aeb0a6ca
DOI
10.1101/2021.03.04.433939
Open publication

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Positional SHAP (PoSHAP) for Interpretation of Machine Learning Models Trained from Biological SequencesDOI 10.1101/2021.03.04.433939
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