Article
Deep learning pan-specific model for interpretable MHC-I peptide binding prediction with improved attention mechanism.
Proteins - 1 Jul 2021
Jin Jing, Liu Zhonghao, Nasiri Alireza, Cui Yuxin, Louis Stephen-Yves, Zhang Ansi, Zhao Yong, Hu Jianjun
Abstract excerpt
Accurate prediction of peptide binding affinity to the major histocompatibility complex (MHC) proteins has the potential to design better therapeutic vaccines. Previous work has shown that pan-specific prediction algorithms can achieve better prediction performance than other approaches. However, most of the top algorithms are neural networks based black box models. Here, we propose DeepAttentionPan, an improved...
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