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The genetic and ecological landscape of plasmids in the human gut

2020-11-01

Abstract excerpt

Despite their prevalence and impact on microbial lifestyles, ecological and evolutionary insights into naturally occurring plasmids are far from complete. Here we developed a machine learning model, PlasX, which identified 68,350 non-redundant plasmids across human gut metagenomes, and we organized them into 1,169 evolutionarily cohesive ‘plasmid systems’ using our sequence containment-aware network partitioning a...

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Identifiers and source

Literature Corpus work
424a8ec0-54df-56e1-b5f0-45dc9dd2ae7e
DOI
10.1101/2020.11.01.361691
Open publication

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The genetic and ecological landscape of plasmids in the human gutDOI 10.1101/2020.11.01.361691
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