Article

Genomic infectious disease epidemiology in partially sampled and ongoing outbreaks

2016-07-22

Abstract excerpt

Genomic data is increasingly being used to understand infectious disease epidemiology. Isolates from a given outbreak are sequenced, and the patterns of shared variation are used to infer which isolates within the outbreak are most closely related to each other. Unfortunately, the phylogenetic trees typically used to represent this variation are not directly informative about who infected whom - a phylogenetic tre...

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Identifiers and source

Literature Corpus work: 0dd15405-bc54-5f98-a478-c67cfdcae11d
DOI: 10.1101/065334

Open publication

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