Article

Bayesian inference of infectious disease transmission from whole genome sequence data

2013-12-16

Abstract excerpt

Genomics is increasingly being used to investigate disease outbreaks, but an important question remains unanswered – how well do genomic data capture known transmission events, particularly for pathogens with long carriage periods or large within-host population sizes? Here we present a novel Bayesian approach to reconstruct densely-sampled outbreaks from genomic data whilst considering within-host diversity. We i...

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Identifiers and source

Literature Corpus work: 8cac8f18-63ed-5a15-814a-990c8e56aa37
DOI: 10.1101/001388

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