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Automated whole genome sequencing platform for bacterial strain typing in clinical microbiology laboratories

22 Apr 2025

Abstract excerpt

ABSTRACT Nosocomial outbreaks impact patient safety and place an economic burden on healthcare facilities. Laboratory testing plays a crucial role in outbreak investigation and guides containment efforts. In recent years, whole genome sequencing (WGS) methods have replaced traditional typing methods due to higher resolution and simplified workflows. Though an improvement from previous methods, bacterial WGS is...

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PMID: 40261051
DOI: 10.1128/jcm.00178-25

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