Article
Reconstructing the regulatory programs underlying the phenotypic plasticity of neural cancers.
Nature communications - 9 Nov 2024
Larsson Ida, Held Felix, Popova Gergana, Koc Alper, Kundu Soumi, Jörnsten Rebecka, Nelander Sven
Abstract excerpt
Nervous system cancers exhibit diverse transcriptional cell states influenced by normal development, injury response, and growth. However, the understanding of these states' regulation and pharmacological relevance remains limited. Here we present "single-cell regulatory-driven clustering" (scregclust), a method that reconstructs cellular regulatory programs from extensive collections of single-cell RNA...
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