Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Spoligotyping of Mycobacterium tuberculosis - Comparing in vitro and in silico approaches.

Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases - 1 Nov 2023

Bakuła Zofia, Dziurzyński Mikołaj, Decewicz Przemysław, Bakonytė Daiva, Vasiliauskaitė Laima, Nakčerienė Birutė, Krenke Rafał, Stakėnas Petras, Jagielski Tomasz

Abstract excerpt

Spoligotyping is one of the molecular typing methods widely used for exploring the genetic variety of Mycobacterium tuberculosis. The aim of this study was to compare the spoligoprofiles of M. tuberculosis clinical isolates, obtained using in vitro and in silico approaches. The study included 230 M. tuberculosis isolates, recovered from Poland and Lithuania between 2018 and 2021. Spoligotyping in vitro was...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Bacterial Typing Techniques
Share to Genotype

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Molecular Typing

Share to Mycobacterium tuberculosis

Share to Tuberculosis

Share to Whole Genome Sequencing

Source

Identifiers

PMID: 37757901
DOI: 10.1016/j.meegid.2023.105508

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 2 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Spoligotyping of Mycobacterium tuberculosis - Comparing in vitro and in silico approaches.PMID 37757901Read ↗

Consistency of Mycobacterium tuberculosis Complex Spoligotyping between the Membrane-Based Method and In Silico Approach.Semantic proximity Read ↗

Comparison of in silico predicted Mycobacterium tuberculosis spoligotypes and lineages from whole genome sequencing data.Semantic proximity Read ↗

SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences.Semantic proximity Read ↗

SpolSimilaritySearch - A web tool to compare and search similarities between spoligotypes of Mycobacterium tuberculosis complex.Semantic proximity Read ↗

Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiologySemantic proximity Read ↗

Comparison between spoligotyping and IS6110 restriction fragment length polymorphisms in molecular genotyping analysis of Mycobacterium tuberculosis strains.Semantic proximity Read ↗

Strain classification of Mycobacterium tuberculosis: congruence between large sequence polymorphisms and spoligotypes.Semantic proximity Read ↗

Development, Evaluation, and Implementation of a House-Made Targeted Next-Generation Sequencing Spoligotyping in a French Laboratory.Semantic proximity Read ↗

Spoligotype signatures in the Mycobacterium tuberculosis complex.Semantic proximity Read ↗

Mycobacterium tuberculosis spoligotypes that may derive from mixed strain infections are revealed by a novel computational approach.Semantic proximity Read ↗

Spoligotype Database of <i>Mycobacterium tuberculosis</i>: Biogeographic Distribution of Shared Types and Epidemiologic and Phylogenetic PerspectivesSemantic proximity Read ↗

Spoligotype Database of<i>Mycobacterium tuberculosis</i>: Biogeographic Distribution of Shared Types and Epidemiologic and Phylogenetic PerspectivesSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.