Article
Imputation of low-coverage sequencing data from 150,119 UK Biobank genomes.
Nature genetics - 1 Jul 2023
Rubinacci Simone, Hofmeister Robin J, Sousa da Mota Bárbara, Delaneau Olivier
Abstract excerpt
The release of 150,119 UK Biobank sequences represents an unprecedented opportunity as a reference panel to impute low-coverage whole-genome sequencing data with high accuracy but current methods cannot cope with the size of the data. Here we introduce GLIMPSE2, a low-coverage whole-genome sequencing imputation method that scales sublinearly in both the number of samples and markers, achieving efficient...
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