Article
Haplotyping interspecific hybrids by dual alignment to both parental genomes.
The plant genome - 1 Jun 2023
Brown Pat J
Abstract excerpt
Sequencing-based genotyping of heterozygous diploids requires sufficient depth to accurately call heterozygous genotypes. In interspecific hybrids, alignment of reads to both parental genomes simultaneously can generate haploid data, potentially eliminating the problem of heterozygosity. Two populations of interspecific hybrid rootstocks of walnut (Juglans) and pistachio (Pistacia) were genotyped using alignment...
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