Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Genetic Diversity Assessment in Plants from Reduced Representation Sequencing Data.

Methods in molecular biology (Clifton, N.J.) - 1 Jan 2024

Jiménez-Madrigal José P, Till Bradley J, Gatica-Arias Andrés

Abstract excerpt

Genetic diversity refers to the variety of genetic traits within a population or a species. It is an essential aspect of both plant ecology and plant breeding because it contributes to the adaptability, survival, and resilience of populations in changing environments. This chapter outlines a pipeline for estimating genetic diversity statistics from reduced representation or whole genome sequencing data. The...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Computational Biology
Share to Genetic Variation
Share to Genome, Plant

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genomics

Share to High-Throughput Nucleotide Sequencing

Share to Plants

Share to Sequence Analysis, DNA

Share to Software

Source

Identifiers

PMID: 38656485
DOI: 10.1007/978-1-0716-3778-4_7

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Genetic Diversity Assessment in Plants from Reduced Representation Sequencing Data.PMID 38656485Read ↗

Reduced representation approaches to interrogate genome diversity in large repetitive plant genomes.Semantic proximity Read ↗

Benchmarking Variant Identification Tools for Plant Diversity DiscoverySemantic proximity Read ↗

Technological Development and Advances for Constructing and Analyzing Plant Pangenomes.Semantic proximity Read ↗

Bioinformatics: identification of markers from next-generation sequence data.Semantic proximity Read ↗

A comprehensive benchmark of graph-based genetic variant genotyping algorithms on plant genomes for creating an accurate ensemble pipelineSemantic proximity Read ↗

A comprehensive benchmark of graph-based genetic variant genotyping algorithms on plant genomes for creating an accurate ensemble pipeline.Semantic proximity Read ↗

Genotyping-by-sequencing approaches to characterize crop genomes: choosing the right tool for the right application.Semantic proximity Read ↗

Genome-wide genetic marker discovery and genotyping using next-generation sequencing.Semantic proximity Read ↗

Rapid genomic characterization of the genus vitis.Semantic proximity Read ↗

SNPGenie: estimating evolutionary parameters to detect natural selection using pooled next-generation sequencing data.Semantic proximity Read ↗

Genetic diversity analysis and marker-trait associations in Amaranthus species.Semantic proximity Read ↗

A super-pangenome of the North American wild grape speciesSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.