Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Optimizing Nanopore Sequencing for Rapid Detection of Microbial Species and Antimicrobial Resistance in Patients at Risk of Surgical Site Infections

16 Feb 2022

Abstract excerpt

Surgical site infections (SSI) are a significant burden to patients and health care systems. They increase mortality rates, length of hospital stays, and associated health care costs. To reduce the risk of SSI, surgical patients are administered broad-spectrum antibiotics that are later adapted to target microbial species detected at the site of surgical incision. Use of broad-spectrum antibiotics can be harmful...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Bacterial Identification and Susceptibility Testing
Share to Orthopedic Infections and Treatments

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Source

Identifiers

PMID: 35171692
DOI: 10.1128/msphere.00964-21

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 8 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Optimizing Nanopore Sequencing for Rapid Detection of Microbial Species and Antimicrobial Resistance in Patients at Risk of Surgical Site InfectionsPMID 35171692Read ↗

The application of targeted nanopore sequencing for the identification of pathogens and resistance genes in lower respiratory tract infectionsSemantic proximity Read ↗

Optimizing and Evaluating Nanopore-Based Targeted and Metagenomic Sequencing Workflows for Rapid Diagnosis of Acute Invasive Infections from Normally Sterile Body FluidsSemantic proximity Read ↗

Same-Day Simultaneous Diagnosis of Bacterial and Fungal Infections in Clinical Practice by Nanopore Targeted SequencingSemantic proximity Read ↗

Metagenomic identification of pathogens and antimicrobial-resistant genes in bacterial positive blood cultures by nanopore sequencingSemantic proximity Read ↗

Rapid nanopore-based DNA sequencing protocol of antibiotic-resistant bacteria for use in surveillance and outbreak investigationSemantic proximity Read ↗

The clinical utility of Nanopore 16S rRNA gene sequencing for direct bacterial identification in normally sterile body fluidsSemantic proximity Read ↗

Preliminary assessment of nanopore-based metagenomic sequencing for the diagnosis of prosthetic joint infectionSemantic proximity Read ↗

Molecular Rapid Diagnostic Testing for Bloodstream Infections: Nanopore Targeted Sequencing with Pathogen-Specific PrimersSemantic proximity Read ↗

Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencingSemantic proximity Read ↗

DNA extraction of microbial DNA directly from infected tissue: an optimized protocol for use in nanopore sequencingSemantic proximity Read ↗

Molecular rapid diagnostic testing for bloodstream infections: Nanopore targeted sequencing with pathogen-specific primersSemantic proximity Read ↗

Metagenomic Diagnosis for a Culture-Negative Sample From a Patient With Severe Pneumonia by Nanopore and Next-Generation SequencingSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.