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Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing

6 May 2020

Abstract excerpt

Abstract Bloodstream infections (BSI) and sepsis are major causes of morbidity and mortality worldwide. Blood culture-based diagnostics usually requires 1–2 days for identification of bacterial agent and an additional 2–3 days for phenotypic determination of antibiotic susceptibility pattern. With the escalating burden of antimicrobial resistance (AMR) rapid diagnostics becomes increasingly important to secure...

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Share to Bacterial Identification and Susceptibility Testing
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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 32376847
DOI: 10.1038/s41598-020-64616-x

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