Article
Managing High-Density Genotyping Data with Gigwa.
Methods in molecular biology (Clifton, N.J.) - 1 Jan 2022
Sempéré Guilhem, Larmande Pierre, Rouard Mathieu
Abstract excerpt
Next generation sequencing technologies enabled high-density genotyping for large numbers of samples. Nowadays SNP calling pipelines produce up to millions of such markers, but which need to be filtered in various ways according to the type of analyses. One of the main challenges still lies in the management of an increasing volume of genotyping files that are difficult to handle for many applications. Here, we...
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