Article

Fast genotyping of known SNPs through approximate <i>k</i> -mer matching

2016-07-12

Abstract excerpt

<h4>Motivation</h4> As the volume of next-generation sequencing (NGS) data increases, faster algorithms become necessary. Although speeding up individual components of a sequence analysis pipeline (e.g. read mapping) can reduce the computational cost of analysis, such approaches do not take full advantage of the particulars of a given problem. One problem of great interest, genotyping a known set of variants (e.g...

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Literature Corpus work: e525fd07-5cda-5454-a759-258e9930d7ba
DOI: 10.1101/063446

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