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coronaSPAdes: from biosynthetic gene clusters to RNA viral assemblies

16 Aug 2021

Abstract excerpt

MOTIVATION: The COVID-19 pandemic has ignited a broad scientific interest in viral research in general and coronavirus research in particular. The identification and characterization of viral species in natural reservoirs typically involves de novo assembly. However, existing genome, metagenome and transcriptome assemblers often are not able to assemble many viruses (including coronaviruses) into a single contig....

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Share to Bacteriophages and microbial interactions
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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 34406356
DOI: 10.1093/bioinformatics/btab597

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