Article
A global resource for genomic predictions of antimicrobial resistance and surveillance of Salmonella Typhi at pathogenwatch.
Nature communications - 17 May 2021
Argimón Silvia, Yeats Corin A, Goater Richard J, Abudahab Khalil, Taylor Benjamin, Underwood Anthony, Sánchez-Busó Leonor, Wong Vanessa K, Dyson Zoe A, Nair Satheesh, Park Se Eun, Marks Florian, Page Andrew J, Keane Jacqueline A, Baker Stephen, Holt Kathryn E, Dougan Gordon, Aanensen David M
Abstract excerpt
As whole-genome sequencing capacity becomes increasingly decentralized, there is a growing opportunity for collaboration and the sharing of surveillance data within and between countries to inform typhoid control policies. This vision requires free, community-driven tools that facilitate access to genomic data for public health on a global scale. Here we present the Pathogenwatch scheme for Salmonella enterica...
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