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Article

Five Years of GenoTyphi: Updates to the Global Salmonella Typhi Genotyping Framework.

The Journal of infectious diseases - 20 Dec 2021

Dyson Zoe A, Holt Kathryn E

Abstract excerpt

In 2016, a whole-genome sequence (WGS)-based genotyping framework (GenoTyphi) was developed and provided a phylogenetically informative nomenclature for lineages of Salmonella Typhi, the etiological agent of typhoid fever. Subsequent surveillance studies have revealed additional epidemiologically important subpopulations, which require the definition of new genotypes and extension of associated software to...

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Identifiers

PMID: 34453548
DOI: 10.1093/infdis/jiab414
PMCID: PMC8687072

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