Article
Applications of genetic-epigenetic tissue mapping for plasma DNA in prenatal testing, transplantation and oncology.
eLife - 23 Mar 2021
Gai Wanxia, Zhou Ze, Agbor-Enoh Sean, Fan Xiaodan, Lian Sheng, Jiang Peiyong, Cheng Suk Hang, Wong John, Chan Stephen L, Jang Moon Kyoo, Yang Yanqin, Liang Raymond Hs, Chan Wai Kong, Ma Edmond Sk, Leung Tak Y, Chiu Rossa Wk, Valantine Hannah, Chan Kc Allen, Lo Ym Dennis
Abstract excerpt
We developed genetic-epigenetic tissue mapping (GETMap) to determine the tissue composition of plasma DNA carrying genetic variants not present in the constitutional genome through comparing their methylation profiles with relevant tissues. We validated this approach by showing that, in pregnant women, circulating DNA carrying fetal-specific alleles was entirely placenta-derived. In lung transplant recipients, we...
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