Article
Genome-scale deconvolution of RNA structure ensembles.
Nature methods - 1 Mar 2021
Morandi Edoardo, Manfredonia Ilaria, Simon Lisa M, Anselmi Francesca, van Hemert Martijn J, Oliviero Salvatore, Incarnato Danny
Abstract excerpt
RNA structure heterogeneity is a major challenge when querying RNA structures with chemical probing. We introduce DRACO, an algorithm for the deconvolution of coexisting RNA conformations from mutational profiling experiments. Analysis of the SARS-CoV-2 genome using dimethyl sulfate mutational profiling with sequencing (DMS-MaPseq) and DRACO, identifies multiple regions that fold into two mutually exclusive...
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