Article
Integrated Proteogenomic Characterization across Major Histological Types of Pediatric Brain Cancer.
Cell - 23 Dec 2020
Petralia Francesca, Tignor Nicole, Reva Boris, Koptyra Mateusz, Chowdhury Shrabanti, Rykunov Dmitry, Krek Azra, Ma Weiping, Zhu Yuankun, Ji Jiayi, Calinawan Anna, Whiteaker Jeffrey R, Colaprico Antonio, Stathias Vasileios, Omelchenko Tatiana, Song Xiaoyu, Raman Pichai, Guo Yiran, Brown Miguel A, Ivey Richard G, Szpyt John, Guha Thakurta Sanjukta, Gritsenko Marina A, Weitz Karl K, Lopez Gonzalo, Kalayci Selim, Gümüş Zeynep H, Yoo Seungyeul, da Veiga Leprevost Felipe, Chang Hui-Yin, Krug Karsten, Katsnelson Lizabeth, Wang Ying, Kennedy Jacob J, Voytovich Uliana J, Zhao Lei, Gaonkar Krutika S, Ennis Brian M, Zhang Bo, Baubet Valerie, Tauhid Lamiya, Lilly Jena V, Mason Jennifer L, Farrow Bailey, Young Nathan, Leary Sarah, Moon Jamie, Petyuk Vladislav A, Nazarian Javad, Adappa Nithin D, Palmer James N, Lober Robert M, Rivero-Hinojosa Samuel, Wang Liang-Bo, Wang Joshua M, Broberg Matilda, Chu Rosalie K, Moore Ronald J, Monroe Matthew E, Zhao Rui, Smith Richard D, Zhu Jun, Robles Ana I, Mesri Mehdi, Boja Emily, Hiltke Tara, Rodriguez Henry, Zhang Bing, Schadt Eric E, Mani D R, Ding Li, Iavarone Antonio, Wiznerowicz Maciej, Schürer Stephan, Chen Xi S, Heath Allison P, Rokita Jo Lynne, Nesvizhskii Alexey I, Fenyö David, Rodland Karin D, Liu Tao, Gygi Steven P, Paulovich Amanda G, Resnick Adam C, Storm Phillip B, Rood Brian R, Wang Pei
Abstract excerpt
We report a comprehensive proteogenomics analysis, including whole-genome sequencing, RNA sequencing, and proteomics and phosphoproteomics profiling, of 218 tumors across 7 histological types of childhood brain cancer: low-grade glioma (n = 93), ependymoma (32), high-grade glioma (25), medulloblastoma (22), ganglioglioma (18), craniopharyngioma (16), and atypical teratoid rhabdoid tumor (12). Proteomics data...
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