Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Genome Complexity Browser: Visualization and quantification of genome variability.

PLoS computational biology - 1 Oct 2020

Manolov Alexander, Konanov Dmitry, Fedorov Dmitry, Osmolovsky Ivan, Vereshchagin Rinat, Ilina Elena

Abstract excerpt

Comparative genomics studies may be used to acquire new knowledge regarding genome architecture, which defines the rules for combining sets of genes in the genome of living organisms. Hundreds of thousands of prokaryotic genomes have been sequenced and assembled. However, computational tools capable of simultaneously comparing large numbers of genomes are lacking. We developed the Genome Complexity Browser, a...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Software
Share to Databases, Genetic
Share to Genetic Variation

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genome, Bacterial

Share to Genomics

Share to User-Computer Interface

Source

Open in PubMed Open full text

Identifiers

PMID: 33035207
DOI: 10.1371/journal.pcbi.1008222
PMCID: PMC7577506

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Genome Complexity Browser: Visualization and quantification of genome variability.PMID 33035207Read ↗

Genome Complexity Browser: estimation and visualization of prokaryote genome variabilitySemantic proximity Read ↗

MetaPGN: a pipeline for construction and graphical visualization of annotated pangenome networksSemantic proximity Read ↗

GrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogens.Semantic proximity Read ↗

PGAP-X: extension on pan-genome analysis pipeline.Semantic proximity Read ↗

panModule: detecting conserved modules in the variable regions of a pangenome graphSemantic proximity Read ↗

Comparative analysis and visualization of multiple collinear genomes.Semantic proximity Read ↗

Pangenome graphs and their applications in biodiversity genomics.Semantic proximity Read ↗

Gnom(Cmp): a quantitative approach for comparative analysis of closely related genomes of bacterial pathogens.Semantic proximity Read ↗

Comparative metagenomics using pan-metagenomic graphsSemantic proximity Read ↗

Exploring differences across pangenome-graph representations using <i>Escherichia coli</i> O157:H7 as a modelSemantic proximity Read ↗

Pairwise graph edit distance characterizes the impact of the construction method on pangenome graphsSemantic proximity Read ↗

WebACT: an online genome comparison suite.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.