Article

Pairwise graph edit distance characterizes the impact of the construction method on pangenome graphs

2024-12-11

Abstract excerpt

<h4>Motivation</h4> Pangenome variation graphs are an increasingly used tool to perform genome analysis, aiming to replace a linear reference in a wide variety of genomic analyses. The construction of a variation graph from a collection of chromosome-size genome sequences is a difficult task that is generally addressed using a number of heuristics. The question that arises is to what extent the construction metho...

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Literature Corpus work: fe501dcb-0b46-5a7c-97ba-db16af49f831
DOI: 10.1101/2024.12.06.627166

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