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Article

CaSpER identifies and visualizes CNV events by integrative analysis of single-cell or bulk RNA-sequencing data.

Nature communications - 3 Jan 2020

Serin Harmanci Akdes, Harmanci Arif O, Zhou Xiaobo

Abstract excerpt

RNA sequencing experiments generate large amounts of information about expression levels of genes. Although they are mainly used for quantifying expression levels, they contain much more biologically important information such as copy number variants (CNVs). Here, we present CaSpER, a signal processing approach for identification, visualization, and integrative analysis of focal and large-scale CNV events in...

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Identifiers

PMID: 31900397
DOI: 10.1038/s41467-019-13779-x
PMCID: PMC6941987

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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