Article
A heuristic method for fast and accurate phasing and imputation of single-nucleotide polymorphism data in bi-parental plant populations.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik - 1 Nov 2018
Gonen Serap, Wimmer Valentin, Gaynor R Chris, Byrne Ed, Gorjanc Gregor, Hickey John M
Abstract excerpt
Key message New fast and accurate method for phasing and imputation of SNP chip genotypes within diploid bi-parental plant populations. This paper presents a new heuristic method for phasing and imputation of genomic data in diploid plant species. Our method, called AlphaPlantImpute, explicitly leverages features of plant breeding programmes to maximise the accuracy of imputation. The features are a small number...
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