Article
Diversity-generating retroelements: natural variation, classification and evolution inferred from a large-scale genomic survey.
Nucleic acids research - 9 Jan 2018
Wu Li, Gingery Mari, Abebe Michael, Arambula Diego, Czornyj Elizabeth, Handa Sumit, Khan Hamza, Liu Minghsun, Pohlschroder Mechthild, Shaw Kharissa L, Du Amy, Guo Huatao, Ghosh Partho, Miller Jeff F, Zimmerly Steven
Abstract excerpt
Diversity-generating retroelements (DGRs) are novel genetic elements that use reverse transcription to generate vast numbers of sequence variants in specific target genes. Here, we present a detailed comparative bioinformatic analysis that depicts the landscape of DGR sequences in nature as represented by data in GenBank. Over 350 unique DGRs are identified, which together form a curated reference set of...
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