Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Reliable Detection of Herpes Simplex Virus Sequence Variation by High-Throughput Resequencing.

Viruses - 16 Aug 2017

Morse Alison M, Calabro Kaitlyn R, Fear Justin M, Bloom David C, McIntyre Lauren M

Abstract excerpt

High-throughput sequencing (HTS) has resulted in data for a number of herpes simplex virus (HSV) laboratory strains and clinical isolates. The knowledge of these sequences has been critical for investigating viral pathogenicity. However, the assembly of complete herpesviral genomes, including HSV, is complicated due to the existence of large repeat regions and arrays of smaller reiterated sequences that are...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Genetic Variation
Share to Genome, Viral
Share to Herpes Simplex

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to High-Throughput Nucleotide Sequencing

Share to Simplexvirus

Share to Viral Proteins

Source

Open in PubMed Open full text

Identifiers

PMID: 28812996
DOI: 10.3390/v9080226
PMCID: PMC5580483

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Reliable Detection of Herpes Simplex Virus Sequence Variation by High-Throughput Resequencing.PMID 28812996Read ↗

Rapid genome assembly and comparison decode intrastrain variation in human alphaherpesviruses.Semantic proximity Read ↗

Rapid genotyping of targeted viral samples using Illumina short-read sequencing data.Semantic proximity Read ↗

Ultrasensitive capture of human herpes simplex virus genomes directly from clinical samples reveals extraordinarily limited evolution in cell cultureSemantic proximity Read ↗

Combination of long- and short-read sequencing fully resolves complex repeats of herpes simplex virus 2 strain MS complete genomeSemantic proximity Read ↗

Recent advances in inferring viral diversity from high-throughput sequencing data.Semantic proximity Read ↗

De Novo Assembly of Human Herpes Virus Type 1 (HHV-1) Genome, Mining of Non-Canonical Structures and Detection of Novel Drug-Resistance Mutations Using Short- and Long-Read Next Generation Sequencing Technologies.Semantic proximity Read ↗

Multiplex sequencing of seven ocular herpes simplex virus type-1 genomes: phylogeny, sequence variability, and SNP distribution.Semantic proximity Read ↗

Sequence Variability in Clinical and Laboratory Isolates of Herpes Simplex Virus 1 Reveals New MutationsSemantic proximity Read ↗

Molecular method development and establishment of a database for clinical and epidemiological herpes simplex virus 1 strain comparisons.Semantic proximity Read ↗

Identification of Viral Variants from Functional Genomics Data.Semantic proximity Read ↗

Evaluating the performance of tools used to call minority variants from whole genome short-read dataSemantic proximity Read ↗

Genome Sequencing and Analysis of Geographically Diverse Clinical Isolates of Herpes Simplex Virus 2.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.