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Strategies for processing and quality control of Illumina genotyping arrays.

Briefings in bioinformatics - 28 Sept 2018

Zhao Shilin, Jing Wang, Samuels David C, Sheng Quanghu, Shyr Yu, Guo Yan

Abstract excerpt

Illumina genotyping arrays have powered thousands of large-scale genome-wide association studies over the past decade. Yet, because of the tremendous volume and complicated genetic assumptions of Illumina genotyping data, processing and quality control (QC) of these data remain a challenge. Thorough QC ensures the accurate identification of single-nucleotide polymorphisms and is required for the correct...

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PMID: 28334151
DOI: 10.1093/bib/bbx012
PMCID: PMC6171493

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